Screenshots from the qpcR library:


fitting a 4-parameter
sigmoidal model

fitting a 5-parameter
sigmoidal model

fitting replicates into a
'replist' and plotting all

fitting replicates into a
'replist' and display error bars

Analysis of qPCR efficiency
and threshold cycles

outlier detection and fitting
an exponential model

model selection by nested
f-tests or Akaike weights

batch calculation of
many qPCR runs

calibration curve
and new samples

examining the fit in
the exponential region

error propagation with
Monte Carlo simulation

permutation of class labels
similar to REST software

averaging a batch of
reference PCRs

'window-of-linearity'
method

bootstrapping/jackknifing
qPCR data => confidence

simulating qPCR data

PRESS statistic

Cy0 value as in Guescini et al.